Last updated: 2018-08-20
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✔ Session information: recorded
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✔ Repository version: ca2b21d
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| File | Version | Author | Date | Message |
|---|---|---|---|---|
| Rmd | ca2b21d | bingrus | 2018-08-20 | wflow_git_commit(“analysis/correlation_analysis.Rmd”) |
| html | 763aeb4 | bingrus | 2018-08-20 | Build site. |
| Rmd | 10c7b44 | bingrus | 2018-08-20 | wflow_publish(“analysis/correlation_analysis.Rmd”) |
| html | 64138e4 | bingrus | 2018-08-20 | Build site. |
| Rmd | f418829 | bingrus | 2018-08-20 | wflow_publish(“analysis/correlation_analysis.Rmd”) |
| html | 3e44254 | bingrus | 2018-08-20 | Build site. |
| Rmd | 2b7366e | bingrus | 2018-08-20 | wflow_git_commit(“analysis/correlation_analysis.Rmd”) |
sessionInfo()
R version 3.5.0 (2018-04-23)
Platform: x86_64-apple-darwin15.6.0 (64-bit)
Running under: macOS High Sierra 10.13.4
Matrix products: default
BLAS: /Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libRblas.0.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libRlapack.dylib
locale:
[1] en_AU.UTF-8/en_AU.UTF-8/en_AU.UTF-8/C/en_AU.UTF-8/en_AU.UTF-8
attached base packages:
[1] grid parallel stats4 stats graphics grDevices utils
[8] datasets methods base
other attached packages:
[1] knitr_1.20 heatmaply_0.15.2 viridis_0.5.1
[4] viridisLite_0.3.0 plotly_4.8.0 gplots_3.0.1
[7] GO.db_3.6.0 GSEABase_1.42.0 graph_1.58.0
[10] GSVA_1.28.0 reshape_0.8.7 ggplot2_3.0.0
[13] GEOquery_2.48.0 annotate_1.58.0 XML_3.98-1.11
[16] org.Hs.eg.db_3.6.0 AnnotationDbi_1.42.1 IRanges_2.14.10
[19] S4Vectors_0.18.3 Biobase_2.40.0 BiocGenerics_0.26.0
[22] limma_3.36.2 htmlwidgets_1.2
loaded via a namespace (and not attached):
[1] colorspace_1.3-2 class_7.3-14 modeltools_0.2-22
[4] mclust_5.4.1 rprojroot_1.3-2 flexmix_2.3-14
[7] bit64_0.9-7 mvtnorm_1.0-8 xml2_1.2.0
[10] codetools_0.2-15 R.methodsS3_1.7.1 robustbase_0.93-2
[13] geneplotter_1.58.0 shinythemes_1.1.1 jsonlite_1.5
[16] workflowr_1.1.1 cluster_2.0.7-1 kernlab_0.9-26
[19] R.oo_1.22.0 shiny_1.1.0 readr_1.1.1
[22] compiler_3.5.0 httr_1.3.1 backports_1.1.2
[25] assertthat_0.2.0 lazyeval_0.2.1 later_0.7.3
[28] htmltools_0.3.6 tools_3.5.0 bindrcpp_0.2.2
[31] gtable_0.2.0 glue_1.2.0 reshape2_1.4.3
[34] dplyr_0.7.6 Rcpp_0.12.17 trimcluster_0.1-2.1
[37] gdata_2.18.0 crosstalk_1.0.0 iterators_1.0.10
[40] fpc_2.1-11.1 stringr_1.3.1 mime_0.5
[43] gtools_3.8.1 dendextend_1.8.0 DEoptimR_1.0-8
[46] MASS_7.3-50 scales_0.5.0 TSP_1.1-6
[49] hms_0.4.2 promises_1.0.1 RColorBrewer_1.1-2
[52] yaml_2.1.19 memoise_1.1.0 gridExtra_2.3
[55] stringi_1.2.3 RSQLite_2.1.1 gclus_1.3.1
[58] foreach_1.4.4 seriation_1.2-3 caTools_1.17.1
[61] rlang_0.2.1 pkgconfig_2.0.1 prabclus_2.2-6
[64] bitops_1.0-6 evaluate_0.10.1 lattice_0.20-35
[67] purrr_0.2.5 bindr_0.1.1 labeling_0.3
[70] bit_1.1-14 tidyselect_0.2.4 plyr_1.8.4
[73] magrittr_1.5 R6_2.2.2 DBI_1.0.0
[76] pillar_1.2.3 whisker_0.3-2 withr_2.1.2
[79] RCurl_1.95-4.10 nnet_7.3-12 tibble_1.4.2
[82] KernSmooth_2.23-15 rmarkdown_1.10 data.table_1.11.4
[85] blob_1.1.1 git2r_0.22.1 digest_0.6.15
[88] diptest_0.75-7 webshot_0.5.0 xtable_1.8-2
[91] tidyr_0.8.1 httpuv_1.4.4.2 R.utils_2.6.0
[94] munsell_0.5.0 registry_0.5
This reproducible R Markdown analysis was created with workflowr 1.1.1